Posts written by Thomas Lumley (2646)

avatar

Thomas Lumley (@tslumley) is Professor of Biostatistics at the University of Auckland. His research interests include semiparametric models, survey sampling, statistical computing, foundations of statistics, and whatever methodological problems his medical collaborators come up with. He also blogs at Biased and Inefficient

September 23, 2025

Panadol scare

R.F. Kennedy Jr managed to predict almost perfectly the day on which his research initiative would “find”  “the” “cause” of autism.  Of course, it’s easier when you don’t have to actually do any new research.

What do we actually know about paracetamol and autism or ADHD?

About a decade ago, there was a surprise finding of a fairly weak but not negligible correlation between paracetamol use during pregnancy and ADHD symptoms in the infant.  A New Zealand study repeated this analysis and found the same answer, at which point it became a bit more interesting.  There have been other replications since then.  The correlation is reasonably well established. The problem is deciding what we can say about causation.

Clearly no-one has done a randomised trial where some pregnant people take paracetamol and others don’t, because that would be unethical and also no-one would volunteer to be in the trial.  In the absence of randomisation, the question is how comparable the paracetamol and non-paracetamol infants would be otherwise. ADHD and autism diagnosis varies in frequency by all sorts of social factors, and there’s good evidence for a genetic basis in at least some cases of autism, so comparability is not automatic.  Also, one thing we do know about all the pregnant people who took paracetamol is that they had a reason to take paracetamol (probably pain or fever).  In contrast to alcohol or tobacco,  no-one’s taking paracetamol just for fun.

So, at that point things were all a bit unclear. On the one hand, maybe you want to avoid paracetamol during pregnancy if you didn’t need it, on the other hand, you probably already were.

Last year, a very large study in Sweden reported its results. They also found a weak correlation between paracetamol use and ADHD and autism symptoms in the whole population. However, they went further than this.  They did a study restricted to comparisons between siblings.  Oversimplifying massively, you could imagine taking all the families with two children where paracetamol was used in pregnancy for just one child and not the other. You could then count up the number of families where the paracetamol-exposed infant had ADHD or autism and not the unexposed child, and vice versa.  The point is that any other factor that differs between families will be the same for the two kids in the comparison and so can’t cause a  correlation. This c0uld be a genetic factor, or some ethnic or social class difference, or access to health care, or many other things.  (My description was oversimplified in the sense that they didn’t just use families with two kids, but also those with more than two, and they adjusted for variables that they know about and are different within a family. )

Importantly, this isn’t just a case of preferring a newer study or a bigger study.  The fact that the Swedish study saw the broadly the same whole-population correlations as other research studies argues that there isn’t something different about Sweden or about their data collection. The fact that they didn’t see the same correlation when doing within-family comparisons argues that the correlation is caused by something that varies between families, not something about individual pregnancies such as paracetamol use.

Estimating rare proportions

There is a statistic circulating on social media claiming that the average person in the USA thinks 21% of the population is transgender.  Obviously this isn’t true (both obviously it isn’t 21% and obviously that isn’t what the average person believes). It’s similar in some ways to the claim that some Americans think Iran is in the middle of the Atlantic Ocean, which I’ve dealt with before, except that estimating small proportions is an extensively studied problem in psychology, so a lot is known about the biases. In fact, if you look at the original source for the claim, demonstrating this phenomenon was the actual point of the story.

As Danielle Navarro explains, all small proportions are overestimated and all large proportions underestimated when people aren’t certain of the true value. This is an extremely consistent phenomenon, to the extent that we can actually say Americans are better informed about the proportion of transgender people than they are about other comparably extreme proportions.

[Update: Andrew Gelman writes about a slightly different, but related phenomenon, in the context of people reporting having been present for mass shootings.  It’s slightly different because people are reporting their own experience, which they presumptively do know, rather than their estimates of some proportion they have no way of knowing. We’d expect the bias to be smaller in this setting, but to still be present — it’s like the estimate of the frequency of virgin birth from the National Longitudinal Study of Youth]

August 8, 2025

Success rates

Complicated interventions benefit from pilot studies, where you try to implement the intervention and see how feasible it is.  These are not designed as evaluations of how good the intervention is; they’re typically too small for that and they may have insufficient attention paid to representativeness.  You typically still would look at the outcome of the intervention, and you would have some idea of what you hoped to see.  As Dan Davies says if you don’t make predictions, you won’t know what to be surprised by (and if you don’t make recommendations, you won’t know what to be disappointed by)

In the new young-offenders bootcamp program, there has been a pilot with ten participants.  According to the news, 7 out of 10 have reoffended so far. Since one out of ten died, it would be generous to summarise the proportion with bad outcomes as 8 out of 10.

Speaking to RNZ, acting senior manager in charge Iain Chapman said at the time the pilot began, the 10 participants were the “most serious and persistent young offenders in the country”.

Going into the pilot and expecting no reoffending would have been naive, he said.

This is absolutely true.  What he didn’t say — and should have — was how much reoffending was reasonable to expect. Did he expect better results than two out of ten? Maybe he didn’t. Perhaps one out of ten is what he expected and getting two out of ten is an amazing success. That wasn’t the impression that the government and the media were giving when the program was announced, though. In particular, getting two out of ten not to reoffend doesn’t stack up well against the death.

If the ten pilot participants had been a representative sample of the sort of people who would go into the program, we could do some statistics.   However, we can’t really do this because the pilot program is so small and we don’t know how the participants were chosen. They presumably weren’t chosen specifically because they were unlikely to benefit, but we can’t say much more.

I would have expected that somewhere on a server in Wellington there is a business case for this program that has someone’s best guess at the likely success rate. It would be good to know if that person is surprised, or disappointed.

BLS accuracy

From economist Justin Wolfers on BlueSky, the record of payroll employment revisions by the US Bureau of Labor Statistics

First: look at 2020!

Next, though, the purple and green lines are quite close together compared to the scale of year-to-year change even when there isn’t a pandemic.

On the other hand, people do actually care about differences of the size we see between the initial and revised estimates, as is demonstrated by the stock market reaction to the revisions.  What this really shows is how difficult the estimation problem is.  People care deeply about changes that are almost invisibly small on this graph, and that are right at the limit of what’s feasible statistically.

The ideal solution is probably for people to be more relaxed about small changes in estimated payroll employment, just as the ideal solution for political opinion polling discourse is for people to have a more realistic view of the limits of estimation. Alternatively, if people want to be unrelaxed about small differences, they need to be willing to pay more to get better estimates.

August 5, 2025

Official statistics

As you may have heard, President Trump has dismissed the head of the US Bureau of Labor Statistics, claiming that payroll employment figures presented by the BLS were faked to make him look bad.

Politicians meddling with official statistics is a bad idea.  This isn’t because official statistics are Pure and Holy and True and above mere political concerns; it’s because official statistics are messy and difficult and hard to get right, but also very valuable.   The benefit-cost ratio of good official statistics is very high; for the NZ Census the ratio was estimated some years back as 10.  National and local governments, non-profits, and businesses use official statistics to make decisions and the stock market responds to the numbers.  On the other hand, the benefit-cost ratio of bad official statistics is very low — if no-one believes the numbers, there’s not a lot to be gained by publishing them.  Since estimation is messy and difficult and hard to get right, trust in official statistics agencies is critical for trust in official statistics.

Agencies don’t always do it perfectly.  It can definitely be necessary to have some sort of independent review at times.  I was on the External Data Quality Panel looking at the 2018 NZ Census, and there has just been an independent review of the UK Office of National Statistics.  The goal is to make sure the agencies have good procedures, evaluated carefully, to produce the best feasible answers.   Political interference, on the other hand, is discouraged by national and  international principles for official statistics.  It’s hard to get rid of once you have it, and very hard to prove you’ve gotten rid of it — like black mould.

The American Economic Association put out a statement on Friday saying that getting rid of the BLS head this way was  a bad idea.  They don’t do this sort of statement very often.  The International Statistical Institute put out a statement today — they do this more often, but it still takes a fairly significant event to get them moving.  The American Statistical Association haven’t said anything yet, but they were all travelling to their annual conference over the weekend, so it might come soon.

August 3, 2025

Where are they now: asthma

From 2015 in the Herald and in StatsChat

Asthma could be cured within five years after scientists discovered what causes the condition and how to switch it off

As I noted at the time: nope, and nope.

Following up, the drugs in question, called calcilytics, continue to not be used to treat asthma. Hope is not entirely lost — a 2022 research paper says

these data firmly suggest that first-in-human studies will be feasible, desirable and achievable in the short term.

So it might still be true that this research eventually leads to useful treatments, but it certainly didn’t happen five years ago.

 

July 23, 2025

Most commonly reported

From XKCD, the most commonly reported plant and animal on iNaturalist for each US state (click to embiggen)

This is mostly about selection biases of various types: how recognisable the plant or animal is and how interesting.  Saguaro, in Arizona, are not exactly rare, but they aren’t the most commonly seen plant. They are famously associated with the southwest desert and immediately recognisable, so they get reported often.  In other states, the most common plant is genuinely common: yarrow in Montana, California Poppy in California, Amur honeysuckle (sadly) in some Kentucky and Indiana.

So what is it in New Zealand? Looking at the “research-grade” reports, because it’s easier, the most common animal seems to be the kererū, with the pīwakawaka second. Easy to recognise, popular, interesting. For plants, it’s the māhoe, which I wasn’t expecting.

July 21, 2025

Briefly

  • In “where are they now” followup: a 2016 StatsChat post examining a claim that dementia cures were just five years away. They weren’t.
  • Data Strips: A nice lookup at ways to show the distribution of a single numeric variable “in-line”
  • As foreshadowed by XKCD, mobile phone acceleration sensors are now genuinely warning of earthquakes-in-progress (media, research paper)
  • Stuff reports a reported sighting of the South Island kōkako. From the South Island Kōkako Trust (via Mike Dickison), a map just of probable encounters with South Island kōkako (ie, leaving out their large collection of “possible” encounters). They’re everywhere!

    That’s the problem. If they really existed in any significant fraction of the places they’ve been reported, you would expect them to be seen a lot more often including by people with cameras at the ready.  It’s not really feasible for a bird to be on the edge of vanishing, all over the South Island simultaneously, for decades, which is why I think it’s an ex-parrot.
July 19, 2025

Good nitrate, bad nitrate

As you probably have heard, tap water in Gore has been running just above the regulatory maximum of 11.3mg/L of nitrate. Nitrate in high enough doses converts hemoglobin to an inactive form, and babies are more susceptible. There are other risks, but they are more speculative according to the CDC. The risk should be pretty low when the concentration is just above the regulatory limit — that’s the point of regulatory limits — and it’s mostly for babies and pregnant women. Still: not ideal, and  you don’t want to let water standards start to slip.

That first link, though, is from 1News.  A couple of months ago they ran a story headed Seven things to eat or avoid to lower your blood pressure. Number 2 on the list is beetroot, based on its high nitrate content. Yes, the same nitrate that’s in the water in Gore. Beetroot juice contains quite a lot more nitrate. A research paper on sports supplements suggests the effective dose would be about 5 mmol per serving, which translates to a bit more than 300 mg, or more than 25 litres of Gore tapwater.

Obviously there’s difference between sports nerds deliberately drinking beetroot for the nitrates and nitrates turning up as an unwanted contaminant for young and old.  The risks are different, and consent matters. Still, it’s a recurrent irritation that the “nitrates good in massive doses” and “nitrates bad even in small doses” stories don’t get cross-referenced a bit more in the media, and we don’t have a more quantitative approach to the risk.  If we’re supposed to believe it’s actually risky to brush your teeth with water that’s 1% above the regulatory limit, the limit is in the wrong place.

 

July 17, 2025

Briefly